Stem-loop sequence hsa-mir-5001

AccessionMI0017867 (change log)
Symbol HGNC:MIR5001
DescriptionHomo sapiens miR-5001 stem-loop
Literature search

4 open access papers mention hsa-mir-5001
(9 sentences)

   --agcuca      cug    g     -     uc  c         --   u 
5'         gggcgg   cgca agggc uggac  ag ggcggagcu  ggc g
           ||||||   |||| ||||| |||||  || |||||||||  ||| c
3'         cccgcc   gugu uccug accug  uc ccgucuuga  ccg u
   uccucucg      -ca    -     g     --  u         cu   g 
Get sequence
Deep sequencing
702 reads, 0 reads per million, 101 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr2: 232550474-232550573 [-]
Database links

Mature sequence hsa-miR-5001-5p

Accession MIMAT0021021

21 - 


 - 44

Get sequence
Deep sequencing480 reads, 62 experiments
Evidence not experimental
Database links
Predicted targets

Mature sequence hsa-miR-5001-3p

Accession MIMAT0021022

60 - 


 - 81

Get sequence
Deep sequencing185 reads, 69 experiments
Evidence not experimental
Database links
Predicted targets


PMID:21558790 "Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis" Hansen TB, Kjems J, Bramsen JB RNA Biol. 8:378-383(2011).
PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).