Stem-loop cel-mir-4923b

Accession

MI0017711

Description

Caenorhabditis elegans cel-mir-4923b precursor miRNA

Literature search

1 open access papers mention cel-mir-4923b
(2 sentences)

Sequence

49 reads, 1 reads per million, 10 experiments

guaagcaaauucccgucauuuucuggaaauauuuugaAACGGCGGCAAUUUGUUUACAG
(((((((((((.(((((..((((............)))).))))).)))))))))))..

Structure

--           c     au    uggaa 
  guaagcaaauu ccguc  uuuc     a
  ||||||||||| |||||  ||||      
  CAUUUGUUUAA GGCGG  AAag     u
GA           C     -C    uuuua 

Annotation confidence Not enough data

Genome context

chrX: 1879640-1879698 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cel-mir-4923b

Mature cel-miR-4923b

• Accession: MIMAT0020131
• Description: Caenorhabditis elegans cel-miR-4923b mature miRNA
• Sequence: 38 - AACGGCGGCAAUUUGUUUACAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177960
   Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
   "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
   "Genome Res (2011) 21:286-300