Stem-loop sequence hsa-mir-4773-1

Accession

MI0017415 (change log)

Symbol

HGNC:MIR4773-1

Description

Homo sapiens miR-4773-1 stem-loop

Gene family

MIPF0001250; mir-4773

Stem-loop

   u                                  auu 
5'  gcuccccagccuuucuaugcuccuguucugcuuu   u
    ||||||||||||||||||||||||||||||||||    
3'  cgaggggucggaaagauacgaggacaagacgaaa   c
   a                                  cua 

Deep sequencing

62 reads, 17.1 reads per million, 41 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 151368334-151368411 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000332342 ; RND3-003; intron 1

  ENST00000439275 ; RND3-003; intron 1

Clustered miRNAs

< 10kb from hsa-mir-4773-1

• hsa-mir-4773-2: chr2: 151368334-151368411 [-]
• hsa-mir-4773-1: chr2: 151368334-151368411 [+]

Database links

• EntrezGene:MIR4773-1
• HGNC:MIR4773-1
• miRBase Tracker:MI0017415

Mature sequence hsa-miR-4773

• Accession: MIMAT0019928
• Sequence: 48 - cagaacaggagcauagaaaggc - 69
• Deep sequencing: 41 reads, 12 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4773
  • TargetScanVert:hsa-miR-4773
  • miRDB:hsa-miR-4773

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).