Stem-loop sequence hsa-mir-4641

Accession

MI0017268 (change log)

Symbol

HGNC:MIR4641

Description

Homo sapiens miR-4641 stem-loop

Literature search

1 open access papers mention hsa-mir-4641
(1 sentences)

Stem-loop

   gg      --  --g    ga         -a  a 
5'   ggggca  gg   ggca  gggcaucag  gg c
     ||||||  ||   ||||  |||||||||  ||  
3'   cuccgu  uc   ccgu  cccgugguc  cc a
   ga      uu  aua    -a         cg  g 

Deep sequencing

54 reads, 33.3 reads per million, 30 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr6: 41598723-41598788 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4641
• HGNC:MIR4641
• miRBase Tracker:MI0017268

Mature sequence hsa-miR-4641

• Accession: MIMAT0019701
• Sequence: 42 - ugcccaugccauacuuuugccuca - 65
• Deep sequencing: 45 reads, 25 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4641
  • TargetScanVert:hsa-miR-4641
  • miRDB:hsa-miR-4641

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).