miRBase entry: pma-mir-4570

Stem-loop pma-mir-4570

Accession

MI0017180

Description

Petromyzon marinus pma-mir-4570 precursor miRNA

Sequence

ccugagugugucuagaaccauaguuuaacuguaaacacuaucaaucaaaauugUUGAACUAUGUAUCUGGAUGCguucuuu
...(((((((((((((..(((((((((((.......................)))))))))))..)))))))))))))...

Structure

ccu             ac           uguaaacacu 
   gagugugucuaga  cauaguuuaac          a
   |||||||||||||  |||||||||||          u
   cuugCGUAGGUCU  GUAUCAAGUUg          c
uuu             AU           uuaaaacuaa

Annotation confidence Not enough data

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Genome context

GL477899.1: 7547-7627 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-4570

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pma-miR-4570

Accession	MIMAT0019602
Description	Petromyzon marinus pma-miR-4570 mature miRNA
Sequence	54 - UUGAACUAUGUAUCUGGAUGC - 74
Evidence	experimental 454 [1]

References

PubMed ID: 20959416
microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
"Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
"Proc Natl Acad Sci U S A (2010) 107:19379-19383