Stem-loop pma-mir-497

Accession

MI0017138

Description

Petromyzon marinus pma-mir-497 precursor miRNA

Sequence

ccggccacuggugCAGCAGCACAACACGAUCUGUUuagcuuuggcucggCCAGAGCGUGGUGUGCUGCAGCacaaggguagg
((.(((.((.((((.((((((((.((((.((((((.(((....))).)).)))).)))).)))))))).)))).))))).))

Structure

  g   a  g    A        A    A    -  u   u 
cc gcc cu gugC GCAGCACA CACG UCUG UU agc u
|| ||| || |||| |||||||| |||| |||| || |||  
gg ugg ga caCG CGUCGUGU GUGC AGAC gg ucg u
  a   -  a    A        G    G    C  c   g 

Annotation confidence Not enough data

Genome context

GL482751.1: 8702-8783 [+]

Mature pma-miR-497-5p

• Accession: MIMAT0019556
• Description: Petromyzon marinus pma-miR-497-5p mature miRNA
• Sequence: 14 - CAGCAGCACAACACGAUCUGUU - 35
• Evidence: experimental ; 454 [1]

Mature pma-miR-497-3p

• Accession: MIMAT0019557
• Description: Petromyzon marinus pma-miR-497-3p mature miRNA
• Sequence: 50 - CCAGAGCGUGGUGUGCUGCAGC - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383