Stem-loop pma-mir-375b

Accession

MI0017128

Description

Petromyzon marinus pma-mir-375b precursor miRNA

Gene family

MIPF0000114; mir-375

Sequence

ccucugcgucugcgcaACGCCGAGCCCGACGCACAAUGCcugcucugucacggcgcguUUUGUUCGUUCGGCUCGCGUUGcgcaggcacggcca
...(((.(((((((((((((.(((((.((((.((((.((.((((.......)))).)).)))).)))).)))))))))))))))))).)))...

Structure

ccu   c             C     C    C    U  c    cu 
   cug gucugcgcaACGC GAGCC GACG ACAA GC ugcu  g
   ||| ||||||||||||| ||||| |||| |||| || ||||  u
   ggc cggacgcGUUGCG CUCGG UUGC UGUU ug gcgg  c
acc   a             -     C    U    U  c    ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-375b-5p

• Accession: MIMAT0019544
• Description: Petromyzon marinus pma-miR-375b-5p mature miRNA
• Sequence: 17 - ACGCCGAGCCCGACGCACAAUGC - 39
• Evidence: experimental ; 454 [1]

Mature pma-miR-375b-3p

• Accession: MIMAT0019545
• Description: Petromyzon marinus pma-miR-375b-3p mature miRNA
• Sequence: 59 - UUUGUUCGUUCGGCUCGCGUUG - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383