Stem-loop pma-mir-301b

Accession

MI0017122

Description

Petromyzon marinus pma-mir-301b precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

gcugccagcagacgcucugacagcguugcacuacugugcagccugcagcaagCAGUGCAAUAGCAUUGUCAAAGCAucugagggcagc
((((((..((((.(((.(((((((((((((((.((.(((........))))).)))))))).))..))))).))).))))..))))))

Structure

      ag    c   c     --  -        a  g   agc 
gcugcc  caga gcu ugaca  gc guugcacu cu ugc   c
||||||  |||| ||| |||||  || |||||||| || |||    
cgacgg  gucu CGA ACUGU  CG UAACGUGA ga acg   u
      ga    A   A     UA  A        C  -   acg 

Annotation confidence Not enough data

Genome context

GL479242.1: 40480-40567 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-301b

Mature pma-miR-301b

• Accession: MIMAT0019537
• Description: Petromyzon marinus pma-miR-301b mature miRNA
• Sequence: 53 - CAGUGCAAUAGCAUUGUCAAAGCA - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383