Stem-loop pma-mir-216b

Accession

MI0017113

Description

Petromyzon marinus pma-mir-216b precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

auacugcggguuguaAAAUCUCUGCAGGCAACUGUGGAaaggugaccuugucacacauuggccugaagggauuauacaaacuguagcag
...((((((..((((.(((((((.(((((...((((((((((...)))).)).))))...))))).))))))).))))..))))))...

Structure

aua      gu    A       G     AAC    -  -    u 
   cugcgg  ugua AAUCUCU CAGGC   UGUG GA aagg  
   ||||||  |||| ||||||| |||||   |||| || |||| g
   gauguc  acau uuaggga guccg   acac cu uucc  
gac      aa    a       a     guu    a  g    a 

Annotation confidence Not enough data

Genome context

GL476438.1: 664121-664209 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-216b

Mature pma-miR-216b

• Accession: MIMAT0019527
• Description: Petromyzon marinus pma-miR-216b mature miRNA
• Sequence: 16 - AAAUCUCUGCAGGCAACUGUGGA - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383