Stem-loop pma-mir-205a

Accession

MI0017107

Description

Petromyzon marinus pma-mir-205a precursor miRNA

Gene family

MIPF0000058; mir-205

Sequence

uuuccgacgUCCUUCAUUCCACCGGAGUCUGUcaggcuuaaacgacAGAUUUCGGGGGAUGAAGUGCAucggucg
...((((.((.(((((((((.((((((((((((.(.......)))))))))))))))))))))).)).))))...

Structure

uuu    c  C         A            a gc 
   ccga gU CUUCAUUCC CCGGAGUCUGUc g  u
   |||| || ||||||||| |||||||||||| |  u
   ggcu CG GAAGUAGGG GGCUUUAGAcag c  a
gcu    A  U         -            - aa 

Annotation confidence Not enough data

Genome context

GL476785.1: 168784-168858 [+]

Mature pma-miR-205a-5p

• Accession: MIMAT0019517
• Description: Petromyzon marinus pma-miR-205a-5p mature miRNA
• Sequence: 10 - UCCUUCAUUCCACCGGAGUCUGU - 32
• Evidence: experimental ; 454 [1]

Mature pma-miR-205a-3p

• Accession: MIMAT0019518
• Description: Petromyzon marinus pma-miR-205a-3p mature miRNA
• Sequence: 47 - AGAUUUCGGGGGAUGAAGUGCA - 68
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383