Stem-loop pma-mir-153-1

Accession

MI0017085

Description

Petromyzon marinus pma-mir-153-1 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

cagccgauGUCAUUUUUGUGAUUUGCAGCUgguuucauuaguaaagUUGCAUAGUCACAAAAGUGAUCAUuggaag
...(((((((((((((((((((((((((((..............))))))).)))))))))))))).))))))...

Structure

cag      -              -       gguuuc 
   ccgauG UCAUUUUUGUGAUU UGCAGCU      a
   |||||| |||||||||||||| |||||||       
   gguUAC AGUGAAAACACUGA ACGUUga      u
gaa      U              U       aaugau 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-153-5p

• Accession: MIMAT0019483
• Description: Petromyzon marinus pma-miR-153-5p mature miRNA
• Sequence: 9 - GUCAUUUUUGUGAUUUGCAGCU - 30
• Evidence: experimental ; 454 [1]

Mature pma-miR-153-3p

• Accession: MIMAT0019484
• Description: Petromyzon marinus pma-miR-153-3p mature miRNA
• Sequence: 47 - UUGCAUAGUCACAAAAGUGAUCAU - 70
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383