Stem-loop pma-mir-135a

Accession

MI0017071

Description

Petromyzon marinus pma-mir-135a precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

uuguaucugugcuuUAUGGCUUUUUAUUCCUAUGUGAuugcuucuguaaccucGCGUAGGGGUGAAAGCCAUGGAacacggugcaa
.((((.(((((.((((((((((((.((((((((((((((((....))))..)))))))))))))))))))))))).))))))))).

Structure

u    u     c            U            --    u 
 ugua cugug uuUAUGGCUUUU AUUCCUAUGUGA  uugc u
 |||| ||||| |||||||||||| ||||||||||||  ||||  
 acgu ggcac AGGUACCGAAAG UGGGGAUGCGcu  aaug c
a    -     a            -            cc    u 

Annotation confidence Not enough data

Genome context

GL476647.1: 647673-647758 [-]

Mature pma-miR-135a-5p

• Accession: MIMAT0019463
• Description: Petromyzon marinus pma-miR-135a-5p mature miRNA
• Sequence: 15 - UAUGGCUUUUUAUUCCUAUGUGA - 37
• Evidence: experimental ; 454 [1]

Mature pma-miR-135a-3p

• Accession: MIMAT0019464
• Description: Petromyzon marinus pma-miR-135a-3p mature miRNA
• Sequence: 54 - GCGUAGGGGUGAAAGCCAUGGA - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383