Stem-loop pma-mir-100b

Accession

MI0017053

Description

Petromyzon marinus pma-mir-100b precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

cgagcugaucgccacaAACCCGUAGAUUCGAACUUGGGgggggcugaaauccgaacacaaggucgcuucuguggguguguggaggucacgcaaa
...(((((((.(((((.(((((((((..(((.(((((...(((......)))...).)))).)))..))))))))).))))).))))).))...

Structure

cga  -     g     A         UU   A    - Ggg   cu 
   gc ugauc ccaca ACCCGUAGA  CGA CUUG G   ggg  g
   || ||||| ||||| |||||||||  ||| |||| |   |||   
   cg acugg ggugu ugggugucu  gcu gaac c   ccu  a
aaa  c     a     g         uc   g    a aag   aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-100b

• Accession: MIMAT0019439
• Description: Petromyzon marinus pma-miR-100b mature miRNA
• Sequence: 17 - AACCCGUAGAUUCGAACUUGGG - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383