Stem-loop pma-mir-92a

Accession

MI0017050

Description

Petromyzon marinus pma-mir-92a precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

ccugucccgcugaggucaggaugggcagcaaugcgugacuagauccugUAUUGCACUCGUCCCGGCCUUAgcgagauuua
...(((.((((((((((.(((((((..((((((((.((.....)).)))))))).))))))).)))))))))).)))...

Structure

ccu   c          a       ca        u  c 
   guc cgcugagguc ggauggg  gcaaugcg ga u
   ||| |||||||||| |||||||  |||||||| || a
   uag gcgAUUCCGG CCUGCUC  CGUUAUgu cu g
auu   a          C       -A        c  a 

Annotation confidence Not enough data

Genome context

GL478379.1: 407029-407108 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from pma-mir-92a

Mature pma-miR-92a

• Accession: MIMAT0019435
• Description: Petromyzon marinus pma-miR-92a mature miRNA
• Sequence: 49 - UAUUGCACUCGUCCCGGCCUUA - 70
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383