Stem-loop pma-mir-18a

Accession

MI0017017

Description

Petromyzon marinus pma-mir-18a precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

ccugugcuugcuugugcUAAGGUGCAUCUAGUGCAGAUAGuuccgcugcguaaaugcUACUGCUCUAUGUGCUCCUUUAcccacaagaggucacgcu
..(((((((.((((((..((((.((((.(((.((((.((((..............)))))))).))).)))).))))....))))))))).))))..

Structure

cc    -   g      --cU    U    C   U    A    uccgcu 
  ugug cuu cuugug    AAGG GCAU UAG GCAG UAGu      g
  |||| ||| ||||||    |||| |||| ||| |||| ||||       
  gcac gga gaacac    UUCC CGUG AUC CGUC AUcg      c
uc    u   -      ccAU    U    U   U    -    uaaaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-18a-5p

• Accession: MIMAT0019387
• Description: Petromyzon marinus pma-miR-18a-5p mature miRNA
• Sequence: 18 - UAAGGUGCAUCUAGUGCAGAUAG - 40
• Evidence: experimental ; 454 [1]

Mature pma-miR-18a-3p

• Accession: MIMAT0019388
• Description: Petromyzon marinus pma-miR-18a-3p mature miRNA
• Sequence: 58 - UACUGCUCUAUGUGCUCCUUUA - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383