Stem-loop pma-mir-16

Accession

MI0017013

Description

Petromyzon marinus pma-mir-16 precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

ccugcaccgUAGCAGCACGUAAAUAUUGGAGUgugaacucugcgauUCCAGUAUUUCGUGCUGCUGCUGugcggu
.((((((.(((((((((((.(((((((((((((((.....))).))))))))))))))))))))))).)))))).

Structure

c      c           U            -   a 
 cugcac gUAGCAGCACG AAAUAUUGGAGU gug a
 |||||| ||||||||||| |||||||||||| ||| c
 ggcguG CGUCGUCGUGC UUUAUGACCUua cgu u
u      U           -            g   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-16-5p

• Accession: MIMAT0019381
• Description: Petromyzon marinus pma-miR-16-5p mature miRNA
• Sequence: 10 - UAGCAGCACGUAAAUAUUGGAGU - 32
• Evidence: experimental ; 454 [1]

Mature pma-miR-16-3p

• Accession: MIMAT0019382
• Description: Petromyzon marinus pma-miR-16-3p mature miRNA
• Sequence: 47 - UCCAGUAUUUCGUGCUGCUGCUG - 69
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383