Stem-loop pma-mir-9a-1

Accession

MI0017006

Description

Petromyzon marinus pma-mir-9a-1 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

agggacggccccugUCUUUGGUUAUCUAGCUGUAUGagugucagaaucccgccauaaagcuacuuaaccaaaagcagggauccguucc
.(((((((.((((((.((((((((..(((((.((((.(((.........))))))).)))))..)))))))).))))))..)))))))

Structure

a       -c      C        UC     G    a   uca 
 gggacgg  cccugU UUUGGUUA  UAGCU UAUG gug   g
 |||||||  |||||| ||||||||  ||||| |||| |||   a
 ccuugcc  gggacg aaaccaau  aucga auac cgc   a
-       ua      a        uc     a    -   ccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-9a-5p

• Accession: MIMAT0019373
• Description: Petromyzon marinus pma-miR-9a-5p mature miRNA
• Sequence: 15 - UCUUUGGUUAUCUAGCUGUAUG - 36
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383