Stem-loop hvu-MIR1120

Accession

MI0016741

Description

Hordeum vulgare hvu-MIR1120 precursor miRNA

Gene family

MIPF0000443; MIR1120

Literature search

5 open access papers mention hvu-MIR1120
(24 sentences)

Sequence

cuacucccuccuucccauauauaagaguguuuuuaauacuacacuagugugaaaaACAUUCUUAUAUUAUGGGACGGAGgaguu
..(((((.(((.((((((((((((((((((((((.((((((...)))))).))))))))))))))).))))))).)))))))).

Structure

cu     c   u       -               a      c 
  acucc ucc ucccaua uauaagaguguuuuu auacua  
  ||||| ||| ||||||| ||||||||||||||| |||||| a
  ugagG AGG AGGGUAU AUAUUCUUACAaaaa ugugau  
-u     -   C       U               g      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR1120

• Accession: MIMAT0018499
• Description: Hordeum vulgare hvu-miR1120 mature miRNA
• Sequence: 56 - ACAUUCUUAUAUUAUGGGACGGAG - 79
• Evidence: not_experimental

References

1. PubMed ID: 20676715
   Regulation of barley miRNAs upon dehydration stress correlated with target gene expression
   "Kantar M, Unver T, Budak H"
   "Funct Integr Genomics (2010) 10:493-507


2. PubMed ID: 23324356
   Developmentally regulated expression and complex processing of barley pri-microRNAs
   Kruszka K, Pacak A, Swida-Barteczka A, Stefaniak AK, Kaja E, Sierocka I, Karlowski W, Jarmolowski A, Szweykowska-Kulinska Z
   BMC Genomics (2013) 14:34