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miRBase |
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Stem-loop sequence csi-MIR399b |
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Accession | MI0016713 (change log) | ||||
Description | Citrus sinensis miR399b stem-loop | ||||
Gene family | MIPF0000015; MIR399 | ||||
Literature search |
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4 open access papers mention csi-MIR399b | ||||
Stem-loop |
gaagcagu - uu uu g ggccaagggcaaagaucauauaauauauuuauau 5' aagc ga uaguuguagggc cucuccuuuggcaggu au a |||| || |||||||||||| |||||||||||||||| || u 3' uucg cu gucaauaucccg gagaggaaaccgucca ua a aauaaauu a uc uu g acuuuuuuaucuuguuauuaaucuuauccguggu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence csi-miR399b-5p |
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Accession | MIMAT0037404 |
Sequence |
24 - agggcuucucuccuuuggcag - 44 |
Evidence | experimental; Illumina [2] |
Mature sequence csi-miR399b-3p |
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Accession | MIMAT0018470 |
Sequence |
127 - ugccaaaggagaguugcccua - 147 |
Evidence | experimental; Illumina [1-2] |
References |
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1 |
PMID:20398412
"Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type"
BMC Genomics. 11:246(2010).
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2 |
PMID:28054378
"MicroRNA annotation of plant genomes - Do it right or not at all"
Bioessays. [Epub prior to print](2017).
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