miRBase entry: gma-MIR4343a

Stem-loop gma-MIR4343a


Accession
MI0016472
Description
Glycine max gma-MIR4343a precursor miRNA
Gene family
MIPF0001150; MIR4343


Sequence

auccguauuguucuguAAAAAACUUACGGAUCAAGUUGAUuuguaaaaggcuuacgaaucaacuugauccguaagccuuuuacaaaacaauaccgau
(((.((((((((.(((((((..((((((((((((((((((((((((.....))))))))))))))))))))))))..))))))).)))))))).)))

Structure
   c        c       AA                        a 
auc guauuguu uguAAAA  CUUACGGAUCAAGUUGAUuuguaa a
||| |||||||| |||||||  |||||||||||||||||||||||| g
uag cauaacaa acauuuu  gaaugccuaguucaacuaagcauu g
   c        a       cc                        c 


Annotation confidence Not enough data
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Genome context
chr15: 18637694-18637790 [-]

Database links

Mature gma-miR4343a

Accession MIMAT0018231
Description Glycine max gma-miR4343a mature miRNA
Sequence 17 - AAAAAACUUACGGAUCAAGUUGAU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14