Stem-loop sequence hsa-mir-3927

Accession

MI0016435 (change log)

Symbol

HGNC:MIR3927

Description

Homo sapiens miR-3927 stem-loop

Gene family

MIPF0001462; mir-3927

Literature search

1 open access papers mention hsa-mir-3927
(2 sentences)

Stem-loop

   u              c           u  u   a 
5'  gccaaugccuauca auaucugccug cc aug c
    |||||||||||||| ||||||||||| || ||| a
3'  cgguuacggauagu uauagauggac gg uac a
   a              u           -  -   a 

Deep sequencing

30 reads, 0 reads per million, 18 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr9: 109511475-109511545 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR3927
• HGNC:MIR3927
• miRBase Tracker:MI0016435

Mature sequence hsa-miR-3927-5p

• Accession: MIMAT0022970
• Sequence: 8 - gccuaucacauaucugccugu - 28
• Deep sequencing: 4 reads, 4 experiments
• Evidence: experimental; Illumina [2]
• Predicted targets:
  • TargetScanVert:hsa-miR-3927-5p
  • miRDB:hsa-miR-3927-5p

Mature sequence hsa-miR-3927-3p

• Accession: MIMAT0018202
• Previous IDs: hsa-miR-3927
• Sequence: 45 - cagguagauauuugauaggcau - 66
• Deep sequencing: 26 reads, 14 experiments
• Evidence: experimental; Illumina [1-2]
• Predicted targets:
  • TargetScanVert:hsa-miR-3927-3p
  • miRDB:hsa-miR-3927-3p

References

1. PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).
2. PMID:21807764 "Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome" Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM Hum Mol Genet. 20:4025-4040(2011).