Stem-loop sequence hsa-mir-3913-2

Accession

MI0016418 (change log)

Symbol

HGNC:MIR3913-2

Description

Homo sapiens miR-3913-2 stem-loop

Gene family

MIPF0001134; mir-3913

Stem-loop

   u  c                                            g 
5'  gu uauaauaaacugaaauauuugggacugaucuugaugucugccaa g
    || ||||||||||||||||||||||||||||||||||||||||||||  
3'  ca auauuauuugacuuuauaaacccugacuagaacuacagacgguu u
   a  a                                            u 

Deep sequencing

1941 reads, 4.35 reads per million, 138 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr12: 69584723-69584822 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-3913-2

• hsa-mir-3913-1: chr12: 69584722-69584823 [-]
• hsa-mir-3913-2: chr12: 69584723-69584822 [+]

Database links

• EntrezGene:MIR3913-2
• HGNC:MIR3913-2
• RNAcentral:URS000075D18D_9606
• miRBase Tracker:MI0016418

Mature sequence hsa-miR-3913-5p

• Accession: MIMAT0018187
• Previous IDs: hsa-miR-3913
• Sequence: 22 - uuugggacugaucuugaugucu - 43
• Deep sequencing: 3628 reads, 134 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000042A173_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3913-5p
  • TargetScanVert:hsa-miR-3913-5p
  • miRDB:hsa-miR-3913-5p

Mature sequence hsa-miR-3913-3p

• Accession: MIMAT0019225
• Sequence: 58 - agacaucaagaucagucccaaa - 79
• Deep sequencing: 226 reads, 60 experiments
• Evidence: not experimental
• Database links:
  • RNAcentral:URS0000242881_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3913-3p
  • TargetScanVert:hsa-miR-3913-3p
  • miRDB:hsa-miR-3913-3p

References

1. PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).