Stem-loop sequence hsa-mir-3665

AccessionMI0016066 (change log)
Symbol HGNC:MIR3665
DescriptionHomo sapiens miR-3665 stem-loop
Literature search

7 open access papers mention hsa-mir-3665
(13 sentences)

Stem-loop 
   ---  -  -   gc   -  --c     c   -     g       -  -      g 
5'    gc gg gcg  ggc gg   ggcag agc agcag ugcgggg cg gcggcc c
      || || |||  ||| ||   ||||| ||| ||||| ||||||| || |||||| g
3'    cg cc cgc  ucg cc   ucguc uug ucguc acgccuc gc cgccgg c
   ccu  a  a   gu   a  ucu     -   c     g       a  u      u
Get sequence
Deep sequencing
5195 reads, 63.9 reads per million, 122 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Comments

This sequence was predicted as a miRNA by Xie et al. [1] and validated later by microarray [2].

Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr13: 77698012-77698116 [-]
sense
OTTHUMT00000045331 ; MYCBP2-006; intron 1
OTTHUMT00000045328 ; MYCBP2-003; intron 2
OTTHUMT00000045330 ; MYCBP2-005; intron 6
OTTHUMT00000045326 ; MYCBP2-001; intron 54
ENST00000466564 ; MYCBP2-006; intron 1
ENST00000482517 ; MYCBP2-003; intron 2
ENST00000498073 ; MYCBP2-005; intron 6
ENST00000544440 ; MYCBP2-001; intron 54
ENST00000407578 ; MYCBP2-203; intron 54
ENST00000357337 ; MYCBP2-201; intron 55
ENST00000360084 ; MYCBP2-202; intron 55
Database links

Mature sequence hsa-miR-3665

Accession MIMAT0018087
Sequence

25 -  

agcaggugcggggcggcg

 - 42

Get sequence
Deep sequencing36 reads, 17 experiments
Evidence experimental; microarray [1]
Predicted targets

References

1
PMID:15735639 "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals" Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M Nature. 434:338-345(2005).
2
PMID:20559549 "Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment" Smith B, Treadwell J, Zhang D, Ly D, McKinnell I, Walker PR, Sikorska M PLoS One. 5:e11109(2010).