Stem-loop sequence hsa-mir-3614

Accession

MI0016004 (change log)

Symbol

HGNC:MIR3614

Description

Homo sapiens miR-3614 stem-loop

Literature search

9 open access papers mention hsa-mir-3614
(75 sentences)

Stem-loop

   gguucuguc ug gc    u                  uuug 
5'          u  g  cacu ggaucugaaggcugcccc    c
            |  |  |||| ||||||||||||||||||     
3'          a  u  gugg ucuagacuuccgaugggg    u
   ucauucuua gu uu    u                  ucuc 

Deep sequencing

854 reads, 19.8 reads per million, 101 experiments

Confidence

Annotation confidence: high

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr17: 56891270-56891355 [-]
• Overlapping transcripts:

  antisense

  OTTHUMT00000445458 ; PPM1E-001; intron 1

  ENST00000308249 ; PPM1E-001; intron 1

Database links

• EntrezGene:MIR3614
• HGNC:MIR3614
• RNAcentral:URS000075E293_9606
• miRBase Tracker:MI0016004

Mature sequence hsa-miR-3614-5p

• Accession: MIMAT0017992
• Sequence: 15 - ccacuuggaucugaaggcugccc - 37
• Deep sequencing: 596 reads, 69 experiments
• Evidence: experimental; Illumina [1-3]
• Database links:
  • RNAcentral:URS00003D4175_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3614-5p
  • TargetScanVert:hsa-miR-3614-5p
  • miRDB:hsa-miR-3614-5p

Mature sequence hsa-miR-3614-3p

• Accession: MIMAT0017993
• Sequence: 53 - uagccuucagaucuugguguuuu - 75
• Deep sequencing: 236 reads, 70 experiments
• Evidence: experimental; Illumina [1-3]
• Database links:
  • RNAcentral:URS000042BE4B_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3614-3p
  • TargetScanVert:hsa-miR-3614-3p
  • miRDB:hsa-miR-3614-3p

References

1. PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).
2. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
3. PMID:21807764 "Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome" Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM Hum Mol Genet. 20:4025-4040(2011).