Stem-loop sequence hsa-mir-378c

Accession

MI0015825 (change log)

Symbol

HGNC:MIR378C

Description

Homo sapiens miR-378c stem-loop

Literature search

193 open access papers mention hsa-mir-378c
(908 sentences)

Stem-loop

   g     ---       ggac ug        agag       gg 
5'  gaggc   caucacu    u  gagucaga    uggaguc  g
    |||||   |||||||    |  ||||||||    |||||||   
3'  cuccg   guggugg    a  uucagucu    acuucag  u
   -     uga       ---a gu        --ca       ac 

Deep sequencing

5884655 reads, 4.98e+03 reads per million, 159 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr10: 130962588-130962668 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR378C
• HGNC:MIR378C
• RNAcentral:URS000075ABA6_9606
• miRBase Tracker:MI0015825

Mature sequence hsa-miR-378c

• Accession: MIMAT0016847
• Sequence: 11 - acuggacuuggagucagaagagugg - 35
• Deep sequencing: 5884646 reads, 159 experiments
• Evidence: experimental; SOLiD [1]
• Database links:
  • RNAcentral:URS000025307A_9606
• Predicted targets:
  • TargetMiner:hsa-miR-378c
  • TargetScanVert:hsa-miR-378c
  • miRDB:hsa-miR-378c
  • microrna.org:hsa-miR-378c

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).