miRBase entry: hsa-mir-3140

Stem-loop hsa-mir-3140


Accession
MI0014163
Symbol
HGNC: MIR3140
Description
Homo sapiens hsa-mir-3140 precursor miRNA
Gene family
MIPF0001615; mir-3140


Sequence

585 reads, 35 reads per million, 55 experiments
ccucuugagguACCUGAAUUACCAAAAGCUUUauguauucugaaguuauugaaaauaagAGCUUUUGGGAAUUCAGGUAGUucaggagug
.((((((((.(((((((((..(((((((((((.(((.(((..........))).))))))))))))))..))))))))).))))))))..

Structure
-c        g         UA           a   a   ugaa 
  cucuugag uACCUGAAU  CCAAAAGCUUU ugu uuc    g
  |||||||| |||||||||  ||||||||||| ||| |||     
  gaggacuU AUGGACUUA  GGUUUUCGAga aua aag    u
gu        G         AG           -   a   uuau 


Annotation confidence High
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Genome context
chr4: 152489327-152489416 [-]

Database links

Mature hsa-miR-3140-3p

Accession MIMAT0015008
Description Homo sapiens hsa-miR-3140-3p mature miRNA
Sequence 60 - AGCUUUUGGGAAUUCAGGUAGU - 81
Evidence experimental
Illumina [1-4]
Database links
Predicted targets

Mature hsa-miR-3140-5p

Accession MIMAT0019204
Description Homo sapiens hsa-miR-3140-5p mature miRNA
Sequence 12 - ACCUGAAUUACCAAAAGCUUU - 32
Evidence experimental
Illumina [3-4]

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637

  3. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86

  4. PubMed ID: 21606961
    Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
    "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
    "Leukemia (2011) 25:1389-1399