Stem-loop sequence hsa-mir-3117

AccessionMI0014130 (change log)
Symbol HGNC:MIR3117
DescriptionHomo sapiens miR-3117 stem-loop
Gene family MIPF0001506; mir-3117
Literature search

1 open access papers mention hsa-mir-3117
(1 sentences)

      -     g   a a       c     a     ggg 
5' ccc uaaag gcc g cacuaua gaguc uauaa   a
   ||| ||||| ||| | ||||||| ||||| |||||   a
3' ggg guuuu ugg c gugauau cucag auauu   g
      u     g   a c       a     g     acg 
Get sequence
Deep sequencing
1856 reads, 0 reads per million, 113 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr1: 66628440-66628517 [+]
OTTHUMT00000025190 ; PDE4B-003; intron 1
OTTHUMT00000388748 ; PDE4B-014; intron 1
OTTHUMT00000388746 ; PDE4B-012; intron 2
OTTHUMT00000388747 ; PDE4B-013; intron 2
OTTHUMT00000025188 ; PDE4B-001; intron 3
OTTHUMT00000025189 ; PDE4B-002; intron 3
ENST00000423207 ; PDE4B-003; intron 1
ENST00000412480 ; PDE4B-014; intron 1
ENST00000532040 ; PDE4B-012; intron 2
ENST00000526666 ; PDE4B-013; intron 2
ENST00000371049 ; PDE4B-201; intron 2
ENST00000329654 ; PDE4B-001; intron 3
ENST00000341517 ; PDE4B-002; intron 3
Database links

Mature sequence hsa-miR-3117-5p

Accession MIMAT0019197

13 - 


 - 32

Get sequence
Deep sequencing13 reads, 11 experiments
Evidence experimental; Illumina [2-3]
Predicted targets

Mature sequence hsa-miR-3117-3p

Accession MIMAT0014979
Previous IDshsa-miR-3117

46 - 


 - 66

Get sequence
Deep sequencing1842 reads, 113 experiments
Evidence experimental; Illumina [1-3]
Database links
Predicted targets


PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).