Stem-loop sequence tgu-mir-29b-2

AccessionMI0013831 (change log)
DescriptionTaeniopygia guttata miR-29b-2 stem-loop
Gene family MIPF0000009; mir-29
Stem-loop 
   ------------         c      g  u    uuucc 
5'             cugguuuca auggug cu agau     c
               ||||||||| |||||| || ||||     a
3'             gacuaaagu uaccac ga ucua     c
   cgaggaucuugu         u      -  -    uguuu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chr26: 3760396-3760466 [+]
sense
ENSTGUT00000018602 ; tgu-mir-29b-2-201; exon 1
Clustered miRNAs
< 10kb from tgu-mir-29b-2
tgu-mir-29b-2chr26: 3760396-3760466 [+]
tgu-mir-29a-2chr26: 3761359-3761429 [+]
Database links

Mature sequence tgu-miR-29b-2-5p

Accession MIMAT0014651
Previous IDstgu-miR-29b*
Sequence

2 -  

ugguuucacaugguggcuuaga

 - 23

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

Mature sequence tgu-miR-29b-3p

Accession MIMAT0014601
Previous IDstgu-miR-29b
Sequence

41 -  

uagcaccauuugaaaucagug

 - 61

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).