Stem-loop sequence tgu-mir-34b

AccessionMI0013751 (change log)
DescriptionTaeniopygia guttata miR-34b stem-loop
Gene family MIPF0000039; mir-34
Literature search

1 open access papers mention tgu-mir-34b
(1 sentences)

Stem-loop 
   aaaauuug   ug aa    --    cau a        
5'         ggg  a  ggcu  cugc   c gccuggu 
           |||  |  ||||  ||||   | |||||| u
3'         ccc  u  ucga  gaug   g cggaccg 
   caacgaaa   gu ag    uu    --u a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chr24: 1752148-1752220 [-]
sense
Clustered miRNAs
< 10kb from tgu-mir-34b
tgu-mir-34c-1chr24: 1752711-1752787 [-]
tgu-mir-34bchr24: 1752148-1752220 [-]
Database links

Mature sequence tgu-miR-34b

Accession MIMAT0014537
Sequence

41 -  

aggcaguguaguuagcugauugc

 - 63

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).