Stem-loop sequence tgu-mir-101-1

AccessionMI0013701 (change log)
DescriptionTaeniopygia guttata miR-101-1 stem-loop
Gene family MIPF0000046; mir-101
Literature search

1 open access papers mention tgu-mir-101-1
(2 sentences)

Stem-loop 
   -------                    cg     guaua 
5'        uuuuucgguuaucaugguac  gugcu     c
          ||||||||||||||||||||  |||||      
3'        aagaagucaauagugucaug  caugg     g
   ugguggu                    -a     aaagu
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chrZ: 64083558-64083629 [-]
sense
ENSTGUT00000018673 ; tgu-mir-101-1-201; exon 1
ENSTGUT00000005348 ; RCL1-201; intron 9
Database links

Mature sequence tgu-miR-101-1-5p

Accession MIMAT0031101
Sequence

5 -  

ucgguuaucaugguaccggugc

 - 26

Get sequence
Evidence experimental; Illumina [2]

Mature sequence tgu-miR-101-3p

Accession MIMAT0014508
Previous IDstgu-miR-101
Sequence

41 -  

guacaguacugugauaacugaa

 - 62

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).