Stem-loop sequence tgu-mir-124-1

AccessionMI0013698 (change log)
DescriptionTaeniopygia guttata miR-124-1 stem-loop
Gene family MIPF0000021; mir-124
Literature search

2 open access papers mention tgu-mir-124-1
(18 sentences)

Stem-loop 
   agagagagagagcgagacagagcacucuaaggc    a    cc        a   ga        uaau 
5'                                  ucug cucu  guguucac gcg  ccuugauu    g
                                    |||| ||||  |||||||| |||  ||||||||    u
3'                                  aggc gaga  cguaagug cgc  ggaauuaa    c
   -------------------------------cu    -    ac        g   ac        caua
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chr2: 120492455-120492565 [+]
intergenic
Database links

Mature sequence tgu-miR-124-5p

Accession MIMAT0014630
Previous IDstgu-miR-124*
Sequence

44 -  

cguguucacagcggaccuuga

 - 64

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Evidence experimental; 454 [1], Illumina [1-2]

Mature sequence tgu-miR-124-3p

Accession MIMAT0014507
Previous IDstgu-miR-124
Sequence

81 -  

uaaggcacgcggugaaugcca

 - 101

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).