Stem-loop tgu-mir-363

Accession

MI0013690

Description

Taeniopygia guttata tgu-mir-363 precursor miRNA

Gene family

MIPF0000138; mir-363

Sequence

guuuugcuguugucggGUGGAUCACGAUGCAAUUUUGAuuaguuuaguaggagaaaAAUUGCACGGUAUCCAUCUGUaaaccgcaagac
(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).)))))))

Structure

       u   gu         CA  A         --GA   gu 
guuuugc guu  cggGUGGAU  CG UGCAAUUUU    uua  u
||||||| |||  |||||||||  || |||||||||    |||   
cagaacg caa  GUCUACCUA  GC ACGUUAAaa    gau  u
       c   aU         UG  -         agag   ga 

Annotation confidence Not enough data

Genome context

chr4A: 7274550-7274638 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from tgu-mir-363

Mature tgu-miR-363-3p

• Accession: MIMAT0014501
• Description: Taeniopygia guttata tgu-miR-363-3p mature miRNA
• Sequence: 57 - AAUUGCACGGUAUCCAUCUGU - 77
• Evidence: experimental ; 454 [1], Illumina [1-2]

Mature tgu-miR-363-5p

• Accession: MIMAT0026972
• Description: Taeniopygia guttata tgu-miR-363-5p mature miRNA
• Sequence: 17 - GUGGAUCACGAUGCAAUUUUGA - 38
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727