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miRBase |
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Stem-loop sequence osa-MIR2872 |
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Accession | MI0013037 (change log) | |||||
Description | Oryza sativa miR2872 stem-loop | |||||
Literature search |
2 open access papers mention osa-MIR2872 | |||||
Stem-loop |
cuuaga uca ua u u ugauu c auggcaacaggaugcucgaucuuccaucagguaaagauaacucuugauuuggcgaaaacuugucacacaugauuugacuuucgaucaacacgaucuaaacuugcaauuucag 5' uuauu uaguucgguuuguagaa cca cuucgagu cu aauca ucaucugcaauug c ||||| ||||||||||||||||| ||| |||||||| || ||||| ||||||||||||| 3' agugg aucaagccaaacaucuu ggu gaagcuca ga uuagu aguagacguuaac a -----a -ug gg u c ----u a ucgauguuagauggaaaaagaacgaacauaagaagcuaagcguacguuccuaaucggaagagucacuuccgguuagucuaaagccgugccaaccauugaucuuuucuguacc |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence osa-miR2872 |
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Accession | MIMAT0013822 |
Sequence |
331 - ugggguucuacaaaccgaacu - 351 |
Deep sequencing | 3 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:19903869
"Rice MicroRNA effector complexes and targets"
Plant Cell. 21:3421-3435(2009).
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