Stem-loop eca-mir-505

Accession

MI0012974

Description

Equus caballus eca-mir-505 precursor miRNA

Gene family

MIPF0000217; mir-505

Literature search

1 open access papers mention eca-mir-505
(4 sentences)

Sequence

86 reads, 13 reads per million, 1 experiments

gaugcacccagugggggagccaggaaguauugauguuucugccaguuuagCGUCAACACUUGCUGGUUUCCUcucuggagcauc
(((((..((((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).)))).)))))

Structure

     ac    u           g    a        ucug 
gaugc  ccag gggggagccag aagu uugauguu    c
|||||  |||| ||||||||||| |||| ||||||||    c
cuacg  gguc cUCCUUUGGUC UUCA AACUGCga    a
     -a    u           G    C        uuug 

Annotation confidence Not enough data

Genome context

chrX: 111378309-111378392 [-]

Mature eca-miR-505

• Accession: MIMAT0013229
• Description: Equus caballus eca-miR-505 mature miRNA
• Sequence: 51 - CGUCAACACUUGCUGGUUUCCU - 72
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131