Stem-loop eca-mir-376b

Accession

MI0012889

Description

Equus caballus eca-mir-376b precursor miRNA

Gene family

MIPF0000091; mir-368

Sequence

28 reads, 4 reads per million, 1 experiments

ugguauuuaaaagguggauauuccuucuauguuuacgugauucauagauaAUCAUAGAGGAAAAUCCAUGUuuucaguauca
(((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).)))))))

Structure

       u    g      a     u     u   --c   a 
ugguauu aaaa guggau uuccu cuaug uua   gug  
||||||| |||| |||||| ||||| ||||| |||   ||| u
acuauga uuuU UACCUA AAGGA GAUAC Aau   uac  
       c    G      A     -     U   aga   u 

Annotation confidence Not enough data

Genome context

chr24: 42911856-42911937 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from eca-mir-376b

Mature eca-miR-376b

• Accession: MIMAT0013144
• Description: Equus caballus eca-miR-376b mature miRNA
• Sequence: 51 - AUCAUAGAGGAAAAUCCAUGU - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131