Stem-loop eca-mir-204b-2

Accession

MI0012862

Description

Equus caballus eca-mir-204b-2 precursor miRNA

Gene family

MIPF0000042; mir-204

Literature search

2 open access papers mention eca-mir-204b-2
(11 sentences)

Sequence

5040 reads, 763 reads per million, 1 experiments

uggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggaggcugggaaggcaaagggacguuca
(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))

Structure

     U          A     U    gagaau 
uggac UCCCUUUGUC UCCUA GCCU      a
||||| |||||||||| ||||| ||||      u
acuug agggaaacgg agggu cgga      a
     c          a     -    ggaagu 

Annotation confidence Not enough data

Genome context

chr23: 20137064-20137131 [+]

Mature eca-miR-204b

• Accession: MIMAT0013112
• Description: Equus caballus eca-miR-204b mature miRNA
• Sequence: 6 - UUCCCUUUGUCAUCCUAUGCCU - 27
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131