Stem-loop eca-mir-30c-2

Accession

MI0012849

Description

Equus caballus eca-mir-30c-2 precursor miRNA

Gene family

MIPF0000005; mir-30

Literature search

3 open access papers mention eca-mir-30c-2
(5 sentences)

Sequence

6565 reads, 994 reads per million, 1 experiments

UGUAAACAUCCUACACUCUCAGCuguggaaagugagaaagcugggagaaggcuguuuacu
.(((((((.(((...(((((((((..............))))))))).))).))))))).

Structure

U       U   ACA         guggaa 
 GUAAACA CCU   CUCUCAGCu      a
 ||||||| |||   |||||||||       
 cauuugu gga   gagggucga      g
u       c   --a         aagagu 

Annotation confidence Not enough data

Genome context

chr20: 62697749-62697808 [-]

Mature eca-miR-30c

• Accession: MIMAT0012915
• Description: Equus caballus eca-miR-30c mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGC - 23
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131