Stem-loop eca-mir-24-1

Accession

MI0012738

Description

Equus caballus eca-mir-24-1 precursor miRNA

Gene family

MIPF0000041; mir-24

Literature search

3 open access papers mention eca-mir-24-1
(4 sentences)

Sequence

2042 reads, 309 reads per million, 1 experiments

cucccgugccuacugagcugaaacacaguugguuugugcagacUGGCUCAGUUCAGCAGGAACAGgag
((((.((.(((.(((((((((....(((((.((....)).)))))..))))))))).))).)).))))

Structure

    c  g   a         aaca     g  u 
cucc gu ccu cugagcuga    caguu gu u
|||| || ||| |||||||||    ||||| ||  
gagG CA GGA GACUUGACU    GUcag cg g
    A  A   C         --CG     a  u 

Annotation confidence Not enough data

Genome context

chr7: 44930163-44930230 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from eca-mir-24-1

Mature eca-miR-24

• Accession: MIMAT0012987
• Description: Equus caballus eca-miR-24 mature miRNA
• Sequence: 44 - UGGCUCAGUUCAGCAGGAACAG - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131