Stem-loop eca-mir-211

Accession

MI0012657

Description

Equus caballus eca-mir-211 precursor miRNA

Gene family

MIPF0000042; mir-204

Literature search

1 open access papers mention eca-mir-211
(4 sentences)

Sequence

1116 reads, 169 reads per million, 1 experiments

ugugacuugugggcUUCCCUUUGUCAUCCUUUGCCUagggcucugaguggggcagggacugcaaaggggugcucaguugucaccucu
.(((((...(((((.(((((((((..(((((.((((...(((...))).)))))))))..))))))))).)))))...)))))....

Structure

---u     uug     U         CA     U    agg   c 
    gugac   ugggc UCCCUUUGU  UCCUU GCCU   gcu  
    |||||   ||||| |||||||||  ||||| ||||   ||| u
    cacug   acucg ggggaaacg  aggga cggg   uga  
ucuc     uug     u         uc     -    --g   g 

Annotation confidence Not enough data

Genome context

chr1: 108264778-108264864 [-]

Mature eca-miR-211

• Accession: MIMAT0012901
• Description: Equus caballus eca-miR-211 mature miRNA
• Sequence: 15 - UUCCCUUUGUCAUCCUUUGCCU - 36
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131