Stem-loop eca-mir-1905a

Accession

MI0012653

Description

Equus caballus eca-mir-1905a precursor miRNA

Gene family

MIPF0000753; mir-1905

Sequence

gucugcuguuggaugcgcuugaucguggcgcccuugggcccCACCACGAGCCCUACCACGCGGUAGgg
.(((((((((((..(.(((((...((((.(((....))).))))..))))).)..))).)))))))).

Structure

g        -   au c     auc    c   c 
 ucugcugu ugg  g gcuug   gugg gcc u
 |||||||| |||  | |||||   |||| |||  
 gGAUGGCG ACC  C CGAGC   CACc cgg u
g        C   AU C     -AC    c   g 

Annotation confidence Not enough data

Genome context

chr1: 89372940-89373007 [-]

Mature eca-miR-1905a

• Accession: MIMAT0012897
• Description: Equus caballus eca-miR-1905a mature miRNA
• Sequence: 42 - CACCACGAGCCCUACCACGCGGUAG - 66
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131