Stem-loop sequence bmo-mir-2738

Accession

MI0012187 (change log)

Description

Bombyx mori miR-2738 stem-loop

Stem-loop

   -      --------------    c  aau    aa      uuaccauu      -  --    u 
5'  auucuc              ugau ua   gaug  uguucu        aaaaga cu  gaua g
    ||||||              |||| ||   ||||  ||||||        |||||| ||  ||||  
3'  uaaggg              acua gu   cuac  gcaaga        uuuucu ga  uuau a
   a      uuuaaaucaaaaau    a  agu    cg      --------      a  ag    a 

Deep sequencing

1237 reads, 133 reads per million, 3 experiments

Confidence

Annotation confidence: low

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004581709.1: 901880-901989 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012187

Mature sequence bmo-miR-2738

• Accession: MIMAT0012616
• Sequence: 61 - aucuuuuagaacggccaucugaug - 84
• Deep sequencing: 1151 reads, 3 experiments
• Evidence: experimental; cloned [1], RT-PCR [1]
• Database links:
  • RNAcentral:URS00002DD809_7091

References

1. PMID:19699294 "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome" Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J Genomics. 94:438-444(2009).