Stem-loop dps-mir-2567a

Accession

MI0011711

Description

Drosophila pseudoobscura dps-mir-2567a precursor miRNA

Gene family

MIPF0000934; mir-2567

Sequence

uuuucaguuuuuuACCAGGUUAGAUUUGCGAAACGuugaauuuaggucgUAUCACAAUUCUAGCCUGGCAAuuuugcuugaaaaa
((((((((...((.((((((((((.(((.((.(((............))).)).))).)))))))))).))....)).)))))).

Structure

-      -  -uuu  A          U   C  A   uugaa 
 uuuuca gu    uu CCAGGUUAGA UUG GA ACG     u
 |||||| ||    || |||||||||| ||| || |||      
 aaaagu cg    AA GGUCCGAUCU AAC CU Ugc     u
a      u  uuuu  C          U   A  A   uggau 

Annotation confidence Not enough data

Genome context

4_group4: 3552872-3552956 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2567a

Mature dps-miR-2567a-5p

• Accession: MIMAT0012396
• Description: Drosophila pseudoobscura dps-miR-2567a-5p mature miRNA
• Sequence: 14 - ACCAGGUUAGAUUUGCGAAACG - 35
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2567a-3p

• Accession: MIMAT0012397
• Description: Drosophila pseudoobscura dps-miR-2567a-3p mature miRNA
• Sequence: 50 - UAUCACAAUUCUAGCCUGGCAA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9