Stem-loop dps-mir-2561

Accession

MI0011705

Description

Drosophila pseudoobscura dps-mir-2561 precursor miRNA

Sequence

ugaucguuuuuucguuugugUGUUUUUUCCUUCUGUGAGUUUUauguauuugcaugucaaAACAGCAGACGGCAGAAACGGCagaaacggcagaaaaugagca
((.((((((((((((((.(((((((((.((.(((((..(((((((((....)))))...)))).))))).)).)))))).))).))))))..)))))))).))

Structure

  a        --      g   -      U  U     GA    ---     a 
ug ucguuuuu  ucguuu ugU GUUUUU CC UCUGU  GUUU   Uaugu u
|| ||||||||  |||||| ||| |||||| || |||||  ||||   |||||  
ac aguaaaag  ggcaaa aCG CAAAGA GG AGACG  CAAa   guacg u
  g        ac      g   G      C  C     -A    acu     u 

Annotation confidence Not enough data

Genome context

4_group3: 8461799-8461901 [+]

Mature dps-miR-2561-5p

• Accession: MIMAT0012384
• Description: Drosophila pseudoobscura dps-miR-2561-5p mature miRNA
• Sequence: 21 - UGUUUUUUCCUUCUGUGAGUUUU - 43
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2561-3p

• Accession: MIMAT0012385
• Description: Drosophila pseudoobscura dps-miR-2561-3p mature miRNA
• Sequence: 61 - AACAGCAGACGGCAGAAACGGC - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9