Stem-loop dps-mir-2531

Accession

MI0011665

Description

Drosophila pseudoobscura dps-mir-2531 precursor miRNA

Sequence

uccugguuuccacggccuucguaacggggccuggccgguggcgugaucccaugcccuuauuuggucaugcgucggaUCACUGCCGGCCCGAUCCCGCCGUcucgccgucuaguga
((((((.....(((((...((...(((((.(.(((((((...(((((((.((((((......))....)))).))))))).))))))).).))))).))....))))))))).))

Structure

  -    uuucc     -cuu  uaa     c u       ggc       c    ----  uu 
uc cugg     acggc    cg   cgggg c ggccggu   gugaucc augc    cc  a
|| ||||     |||||    ||   ||||| | |||||||   ||||||| ||||    ||   
ag gauc     ugccg    GC   GCCCU G CCGGCCG   CACUagg ugcg    gg  u
  u    -----     cucU  --C     A C       --U       c    uacu  uu 

Annotation confidence Not enough data

Genome context

Unknown_group_271: 1068-1182 [-]

Mature dps-miR-2531

• Accession: MIMAT0012320
• Description: Drosophila pseudoobscura dps-miR-2531 mature miRNA
• Sequence: 77 - UCACUGCCGGCCCGAUCCCGCCGU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9