Stem-loop dps-mir-2511-2

Accession

MI0011638

Description

Drosophila pseudoobscura dps-mir-2511-2 precursor miRNA

Gene family

MIPF0000977; mir-2511

Sequence

ucacauucgugcuauauggcacacaguugauuuauauuauuuucuaguucaUAAGUCUGUUGAGUGCCAUAGAgcaagaagugugau
((((((((.((((.((((((((.(((..(((((((((((.....))))..)))))))..))).)))))))).)))).).))))))).

Structure

-       - g    a        a   uu       --    u 
 ucacauu c ugcu uauggcac cag  gauuuau  auua u
 ||||||| | |||| |||||||| |||  |||||||  |||| u
 aguguga g acgA AUACCGUG GUU  CUGAAUa  ugau u
u       a a    G        A   GU       cu    c 

Annotation confidence Not enough data

Genome context

4_group4: 3554138-3554224 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2511-2

Mature dps-miR-2511

• Accession: MIMAT0012296
• Description: Drosophila pseudoobscura dps-miR-2511 mature miRNA
• Sequence: 52 - UAAGUCUGUUGAGUGCCAUAGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9