Stem-loop dps-mir-193

Accession

MI0011621

Description

Drosophila pseudoobscura dps-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

ugcacccauuauAGUUGGGAUUUUUUAGAUCAGCAGuuauugcuauacagccguauuaauaaaucuucUACUGGCCUACUAAGUCCCAACauaaugagagua
(((.(.((((((.((((((((((..(((.((((.((((((((..((((....)))))))))).....)).)))).)))..)))))))))))))))).).)))

Structure

   a c      A          UU   A    C  -----      cu    a 
ugc c cauuau GUUGGGAUUU  UAG UCAG AG     uuauug  auac g
||| | |||||| ||||||||||  ||| |||| ||     ||||||  ||||  
aug g guaaua CAACCCUGAA  AUC GGUC Uc     aauaau  uaug c
   a a      -          UC   C    A  uucua      --    c 

Annotation confidence Not enough data

Genome context

XR_group6: 2746050-2746151 [-]

Mature dps-miR-193-5p

• Accession: MIMAT0012277
• Description: Drosophila pseudoobscura dps-miR-193-5p mature miRNA
• Sequence: 13 - AGUUGGGAUUUUUUAGAUCAGCAG - 36
• Evidence: experimental ; Illumina [1]

Mature dps-miR-193-3p

• Accession: MIMAT0012278
• Description: Drosophila pseudoobscura dps-miR-193-3p mature miRNA
• Sequence: 69 - UACUGGCCUACUAAGUCCCAAC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9