Stem-loop dps-mir-971

Accession

MI0011595

Description

Drosophila pseudoobscura dps-mir-971 precursor miRNA

Gene family

MIPF0000995; mir-971

Sequence

ggaccccaucgcucGCUGUAAAUUGUAAUGGCCAAAGCuuuuuuguugguagcagcUUGGUGUUACUUCUUACAGUGAguguggagcguuucca
((((((((.((((((((((((...((((..(((((.(((.((........)).)))))))).))))...))))))))))))))).).)..))).

Structure

-   -- - -   u            AUU    UG     A   u  uug 
 gga  c c cca cgcucGCUGUAA   GUAA  GCCAA GCu uu   u
 |||  | | ||| ||||||||||||   ||||  ||||| ||| ||    
 ccu  g g ggu gugAGUGACAUU   CAUU  UGGUU cga ga   u
a   uu c a   -            CUU    -G     -   c  ugg 

Annotation confidence Not enough data

Genome context

XL_group3a: 1391627-1391720 [-]

Mature dps-miR-971-5p

• Accession: MIMAT0012225
• Description: Drosophila pseudoobscura dps-miR-971-5p mature miRNA
• Sequence: 15 - GCUGUAAAUUGUAAUGGCCAAAGC - 38
• Evidence: experimental ; Illumina [1]

Mature dps-miR-971-3p

• Accession: MIMAT0012226
• Description: Drosophila pseudoobscura dps-miR-971-3p mature miRNA
• Sequence: 57 - UUGGUGUUACUUCUUACAGUGA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9