Stem-loop sja-let-7

Accession

MI0010668

Description

Schistosoma japonicum sja-let-7 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

14 open access papers mention sja-let-7
(52 sentences)

Sequence

ugGGAGGUAGUUCGUUGUGUGGUuugcuuauuaaaaugaucuuaagaagaccauacaaccgacuggcuuuccca
((((((.(((((.((((((((((((.((((............)))).)))))))))))).))))).)..)))))

Structure

     -- G     C            g    uuaaa 
ugGGA  G UAGUU GUUGUGUGGUuu cuua     a
|||||  | ||||| |||||||||||| ||||      
acccu  c gucag caacauaccaga gaau     u
     uu g     c            a    ucuag 

Annotation confidence Not enough data

Genome context

CABF01067189.1: 5854-5927 [+]

Mature sja-let-7

• Accession: MIMAT0010175
• Description: Schistosoma japonicum sja-let-7 mature miRNA
• Sequence: 3 - GGAGGUAGUUCGUUGUGUGGU - 23
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 19107204
   Identification and characterization of novel microRNAs from Schistosoma japonicum
   Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W
   PLoS One (2008) 3:e4034


2. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596