Stem-loop sequence hsa-mir-1976

Accession

MI0009986 (change log)

Symbol

HGNC:MIR1976

Description

Homo sapiens miR-1976 stem-loop

Gene family

MIPF0001633; mir-1976

Literature search

3 open access papers mention hsa-mir-1976
(12 sentences)

Stem-loop

             a        uc uaa 
5' gcagcaagga ggcagggg  c   g
   |||||||||| ||||||||  |    
3' ugucguuccu ccguccuc  g   g
             c        cu ugu 

Deep sequencing

178 reads, 1.75 reads per million, 57 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr1: 26554542-26554593 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000009505 ; RP11-231P20.2-002; intron 3

  ENST00000451482 ; RP11-231P20.2-002; intron 3

Database links

• EntrezGene:MIR1976
• HGNC:MIR1976
• miRBase Tracker:MI0009986

Mature sequence hsa-miR-1976

• Accession: MIMAT0009451
• Sequence: 33 - ccuccugcccuccuugcugu - 52
• Deep sequencing: 120 reads, 40 experiments
• Evidence: experimental; cloned [1]
• Predicted targets:
  • TargetMiner:hsa-miR-1976
  • TargetScanVert:hsa-miR-1976
  • miRDB:hsa-miR-1976
  • microrna.org:hsa-miR-1976

References

1. PMID:18923441 "Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia" Schotte D, Chau JC, Sylvester G, Liu G, Chen C, van der Velden VH, Broekhuis MJ, Peters TC, Pieters R, den Boer ML Leukemia. 23:313-322(2009).