miRBase entry: dmo-mir-3

Stem-loop dmo-mir-3

Accession

MI0009221

Description

Drosophila mojavensis dmo-mir-3 precursor miRNA

Gene family

MIPF0000140; mir-3

Sequence

ugggaugcauuuugugcagaugucuaacgauuggaaacccaUCACUGGGCAAAGUGUGUCUCAaa
(((((((((((((((.(((((((((((...)))))....))))..)).)))))))))))))))..

Structure

--               g  --    ----     c 
  ugggaugcauuuugu ca  gaug    ucuaa  
  ||||||||||||||| ||  ||||    ||||| g
  ACUCUGUGUGAAACG GU  CUac    agguu  
aa               G  CA    ccaa     a

Annotation confidence Not enough data

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Genome context

scaffold_6496: 20936993-20937057 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dmo-mir-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-3

Accession	MIMAT0008668
Description	Drosophila mojavensis dmo-miR-3 mature miRNA
Sequence	42 - UCACUGGGCAAAGUGUGUCUCA - 63
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218